BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB017H03LP1|AL427218
(991 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1788 1914 0.0
>3x_Contig1788
Length = 28493
Score = 1914 bits (964), Expect = 0.0
Identities = 972/974 (99%), Gaps = 1/974 (0%)
Strand = Plus / Plus
Query: 19 cttcggtatcgttatgctgaaatgttcagatagctgtgggatcaattgcgaaggcgatat 78
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14894 cttcggtatcgttatgctgaaatgttcagatagctgtgggatcaattgcgaaggcgatat 14953
Query: 79 ttcgttaaacgcgcttagatctttatcgataactattttagtcaaacggtcgtatagatg 138
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14954 ttcgttaaacgcgcttagatctttatcgataactattttagtcaaacggtcgtatagatg 15013
Query: 139 tctggattttattcccatcatattgacaatgtatctgattaatgagctgatagtaggaaa 198
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15014 tctggattttattcccatcatattgacaatgtatctgattaatgagctgatagtaggaaa 15073
Query: 199 ggctggcaaaaaaaaaaaaattctacggtatagtaatattacacttggttagatctcctt 258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15074 ggctggcaaaaaaaaaaaaattctacggtatagtaatattacacttggttagatctcctt 15133
Query: 259 gaaatggcactaacgaaagatcggtgttctcggggtattctaattagcacaaataagtcc 318
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15134 gaaatggcactaacgaaagatcggtgttctcggggtattctaattagcacaaataagtcc 15193
Query: 319 agtatgagcgatgccttttttattccaaactggcagatatagaatagataaaaaggatag 378
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15194 agtatgagcgatgccttttttattccaaactggcagatatagaatagataaaaaggatag 15253
Query: 379 tctcggaaaataatatgaaacaacggacttgtaacacctagtcccaatagacagtacacg 438
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15254 tctcggaaaataatatgaaacaacggacttgtaacacctagtcccaatagacagtacacg 15313
Query: 439 gttagccaatcccagctcagccagcagccttataaagttcgttctctagtctgttgattg 498
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15314 gttagccaatcccagctcagccagcagccttataaagttcgttctctagtctgttgattg 15373
Query: 499 accgttctatctttgtagcttagaaacctacatgttatttgaacaaatttcttttattta 558
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15374 accgttctatctttgtagcttagaaacctacatgttatttgaacaaatttcttttattta 15433
Query: 559 tcatttcacataatattgtgcgcatataacaaatttcaccaacttttcacgtaacgaaat 618
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15434 tcatttcacataatattgtgcgcatataacaaatttcaccaacttttcacgtaacgaaat 15493
Query: 619 gtgatattatttaaaggatttcacttaagaacggcaggaattttaacacttaagtacgga 678
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15494 gtgatattatttaaaggatttcacttaagaacggcaggaattttaacacttaagtacgga 15553
Query: 679 agttctaaagatactatagttacatacctgaatacaaaatagatcaacgacatctttact 738
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15554 agttctaaagatactatagttacatacctgaatacaaaatagatcaacgacatctttact 15613
Query: 739 ataatattaaaggctaaggtgtctaataaggtacagtctatataatatcattaattattc 798
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15614 ataatattaaaggctaaggtgtctaataaggtacagtctatataatatcattaattattc 15673
Query: 799 ttggcaagcttgtgctcaatgcactgacaggcaaaactaccaacggcacatagaaacaga 858
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15674 ttggcaagcttgtgctcaatgcactgacaggcaaaactaccaacggcacatagaaacaga 15733
Query: 859 tcattagtagtcacgtgtatttatgcgggtaacactgttcacactggctcatctctgaac 918
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15734 tcattagtagtcacgtgtatttatgcgggtaacactgttcacactggctcatctctgaac 15793
Query: 919 ctttgatcaaaaaaatttacgattttcaaa-caaattcaatatcatcatattctggtgaa 977
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 15794 ctttgatcaaaaaaatttacgattttcaaaccaaattcaatatcatcatattctggtgaa 15853
Query: 978 gtaagcytgaattt 991
|||||| |||||||
Sbjct: 15854 gtaagcttgaattt 15867
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 14,899
Number of Sequences: 1807
Number of extensions: 14899
Number of successful extensions: 172
Number of sequences better than 1.0e-20: 1
length of query: 991
length of database: 10,358,551
effective HSP length: 16
effective length of query: 975
effective length of database: 10,329,639
effective search space: 10071398025
effective search space used: 10071398025
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)